Forum at 15:31, 28 May 2023

2023-05-28T15:31:15Z

← Older revision		Revision as of 15:31, 28 May 2023
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	* [[MikeBennett\|Mike Bennett]]		* [[MikeBennett\|Mike Bennett]]
	* [[RussellReinsch\|Russell Reinsch]]		* [[RussellReinsch\|Russell Reinsch]]

			== Discusssion ==

	[12:14] Gary BC: A theme for organizing the 2023 Ontology Summit... How to "help scientists make better use of ontologies" a goal set by James Overton who is will be be co-organizer with me.		[12:14] Gary BC: A theme for organizing the 2023 Ontology Summit... How to "help scientists make better use of ontologies" a goal set by James Overton who is will be be co-organizer with me.

Forum at 15:29, 16 December 2022

2022-12-16T15:29:51Z

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	== Previous Meetings ==		== Previous Meetings ==
	{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[~~has date::~~<<~~{{#show:{{PAGENAME}}~~\|?~~has date}}]]~~ \|?\|		{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[<<ConferenceCall_2022_10_12]]
	mainlabel=-~~\|sort=has date~~ \|order=desc~~\| format=ul~~\| limit=3}}		\|?\|?Session\|mainlabel=-\|order=desc\|limit=3}}

	== Next Meetings ==		== Next Meetings ==
	{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[~~has date::~~>>~~{{#show:{{PAGENAME}}~~\|?~~has date}}]]~~ \|?\|		{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[>>ConferenceCall_2022_10_12]]
	mainlabel=-~~\|sort=has date~~ \|order=asc~~\| format=ul~~\| limit=3}}		\|?\|?Session\|mainlabel=-\|order=asc\|limit=3}}

	[[Category:OntologySummit2023]]		[[Category:OntologySummit2023]]
	[[Category:Icom_conf_Conference]]		[[Category:Icom_conf_Conference]]
	[[Category:Occurrence\| ]]		[[Category:Occurrence\| ]]

imported>KenBaclawski: /* Discussion */

2022-10-19T03:06:18Z

Discussion

New page

{| class="wikitable" style="float:right; margin-left: 10px;" border="1" cellpadding="10"
|-
! scope="row" | Session
| [[session::Planning]]
|-
! scope="row" | Duration
| [[duration::1 hour]]
|-
! scope="row" rowspan="3" | Date/Time
| [[has date::12 Oct 2022 16:00 GMT]]
|-
| 9:00am PDT/12:00pm EDT
|-
| 5:00pm BST/6:00pm CEST
|-
! scope="row" | Convener
| [[convener::KenBaclawski|Ken Baclawski]]
|}

= [[OntologySummit2023|Ontology Summit 2023]] {{#show:{{PAGENAME}}|?session}} =
{{:OntologySummit2023/Description}}

== Agenda ==
* [[GaryBergCross|Gary Berg-Cross]] will present suggestions for the summit theme. [https://bit.ly/3S71eHX Video Recording]
* Informal "brainstorming" session [https://bit.ly/3TiHVN5 Video Recording]

== Conference Call Information ==
* Date: '''Wednesday, 12 Oct 2022'''
* Start Time: 9:00am PDT / 12:00pm EDT / 6:00pm CEST / 5:00pm BST / 1600 UTC
** ref: [http://www.timeanddate.com/worldclock/fixedtime.html?month=10&day=12&year=2022&hour=12&min=00&sec=0&p1=179 World Clock]
* Expected Call Duration: 1 hour
{{:OntologySummit2023/ConferenceCallInformation}}

== Attendees ==
* [[GaryBergCross|Gary Berg-Cross]]
* [[GeorgeHurlburt|George Hurlburt]]
* [[KenBaclawski|Ken Baclawski]]
* [[MikeBennett|Mike Bennett]]
* [[RussellReinsch|Russell Reinsch]]

[12:14] Gary BC: A theme for organizing the 2023 Ontology Summit... How to "help scientists make better use of ontologies" a goal set by James Overton who is will be be co-organizer with me.
* The Where, Who, and How details would be a good topic for the 2023 Ontology Summit.
* 40% of this could come from the BioMed domain and the OboFoundry and the another 40% from other domains and efforts with the remaining 20% devoted to bringing this together.

[12:15] Gary BC: Talks on Ontology Tools and Workflow management (FAIR ontology support)
* Ontology Development Kit (ODK): A toolkit for initializing a new ontology repository. The template includes a structured directory, a Makefile with automated release workflows, continuous integration testing, and full documentation.
* ROBOT: A command line tool to automate ontology workflows. It includes commands that can be used manually or integrated in automated processes to develop and release ontologies.

[12:16] Gary BC: Example of talk topics: James Overton overview
* COB the use of a high-level, core reference model (Chris Mungall)
* Ontology Development Kit (ODK): A toolkit for initializing a new ontology repository. The template includes a structured directory, a Makefile with automated release workflows, continuous integration testing, and full documentation.
* ROBOT: A command line tool to automate ontology workflows. It includes commands that can be used manually or integrated in automated processes to develop and release ontologies.
* Onto-Animals: Tools to extract external ontology terms, compare ontologies, edit ontology terms, query and visualize ontologies, and more.
* VOCOL: An integrated environment for collaborative vocabulary development
* Karma Data Integration: A data integration tool
* Ontofox: An ontology term and relation extraction and reuse tool
* Ubergraph: A sparql endpoint with many OBO ontologies loaded and pre-reasoned with simple triples materialized
** OBO Dashboard: An assesment of OBO Foundry ontologies conformance to OBO Foundry principles
** OBO Community Health Report: A self-updating assessment of the quality of metadata, responsiveness of the maintainers, and the overall community engagement for each OBO Foundry ontology.

[12:16] Gary BC: have to go. Let me know what else might be discussed about this.

[12:27] Ken Baclawski: We had a nice discussion. The planning process will continue next week at the same time and connection URL.

[12:28] Ken Baclawski: Meeting is adjourned.

[12:32] Gary BC: OK WE can follow up as needed. Maybe a discussion on the Forum???

== Resources ==
* [https://bit.ly/3S71eHX Recording of Proposal by Gary Berg-Cross]
* [https://bit.ly/3TiHVN5 Recording of Discussion Session]

== Previous Meetings ==
{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[has date::<<{{#show:{{PAGENAME}}|?has date}}]] |?|
mainlabel=-|sort=has date |order=desc| format=ul| limit=3}}

== Next Meetings ==
{{#ask: [[Category:OntologySummit2023]] [[Category:Icom_conf_Conference]] [[has date::>>{{#show:{{PAGENAME}}|?has date}}]] |?|
mainlabel=-|sort=has date |order=asc| format=ul| limit=3}}

[[Category:OntologySummit2023]]
[[Category:Icom_conf_Conference]]
[[Category:Occurrence| ]]

ConferenceCall 2022 10 12 - Revision history

Forum at 15:31, 28 May 2023

Forum at 15:29, 16 December 2022

imported>KenBaclawski: /* Discussion */