ConferenceCall 2023 01 18 - Revision history

Forum: /* Resources */

2023-06-01T16:27:05Z

Resources

← Older revision		Revision as of 16:27, 1 June 2023
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	* [https://bit.ly/3ZJpmW0 Cogan Shimizu Slides]		* [https://bit.ly/3ZJpmW0 Cogan Shimizu Slides]
	* [https://bit.ly/3WkN2Nq Video Recording]		* [https://bit.ly/3WkN2Nq Video Recording]
			* [https://youtu.be/MxCmNT3JhmA Video Recording on YouTube]

	== Previous Meetings ==		== Previous Meetings ==

KenBaclawski: /* Agenda */

2023-01-24T21:11:56Z

Agenda

← Older revision		Revision as of 21:11, 24 January 2023
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	* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs		* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs
	* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision'' [https://bit.ly/3HeJ1WI Slides]		* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision'' [https://bit.ly/3HeJ1WI Slides]
	* 12:20 ~~- 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''~~		* 12:20 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''
	* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''
	* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools'' [https://bit.ly/3ZJpmW0 Slides]		* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools'' [https://bit.ly/3ZJpmW0 Slides]
	* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion		* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion

KenBaclawski: /* Discussion */

2023-01-19T02:24:30Z

Discussion

← Older revision		Revision as of 02:24, 19 January 2023
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	== Discussion ==		== Discussion ==
			[12:11] RaviSharma: We start with condolences for Peter Yim who founded Ontolog Forum and ran it for several years. Welcome to the Summit 2023

			[12:15] RaviSharma: we are excited to see 43 participants in the opening session and welcome everyone.

			[12:24] Nico Matentzoglu: OBO Academy: https://oboacademy.github.io/obook

			OBO Tools Workshop recording at ICBO 2022: youtube.com/watch?v=ayHsUkC4nZo

			[12:24] UnCensoredNews.US I am new to ontologies. I am interested in climate change ontologies.

			[12:26] RaviSharma: welcome, we did cover some of it in last year summit, please review some of the sessions on environmental disasters and recordings and slides.

			[12:29] Christopher Lozinski: Are OBO ontologies just trees?

			[12:30] Christopher Lozinski: What language is OBO written in? What database?

			[12:30] Nico Matentzoglu: At OBO there are no climate change ontologies per se, but we have some very active people in COP27 and other such conferences. For example, the godfather of ENVO (https://github.com/EnvironmentOntology/envo), Pier Luigi Buttigieg, is very active on deep water related efforts related to climate.

			[12:31] Nico Matentzoglu: Climate change is so complex - basically all ontologies are relevant to it I think

			[12:31] Cogan Shimizu: You might also reach out to Ellie Young, who is focused on this space, from a community driven standpoint.

			[12:32] Kai: The ESIP community as well Earth Science Information Partnership

			[12:32] Alex Shkotin: soaphub is better as it will be on the session page later.

			[12:33] Alex Shkotin: http://webconf.soaphub.org/conf/room/ontology_summit_2023

			[12:36] Nico Matentzoglu: For those of you familiar with the OWL API, ROBOT can be seen in many ways as a CLI for OWL API. There is nothing really OBO-esque about it, it can be used for any OWL ontology parseable with the OWL API.

			[12:37] Lynn Schriml: Check out ROBOT at http://robot.obolibrary.org

			[12:37] RaviSharma: Q for James about Relationship Ontology, is there an agreed irreducible set of relationships or these have not been analyzed yet?

			[12:38] RaviSharma: from other chat zoom

			[12:38] Alex Shkotin: What about Jena?

			[12:38] Nico Matentzoglu: Yes, in a very limited way as well. ODK includes riot, but in ROBOT we use Jena as a SPARQL endpoint

			[12:39] Alex Shkotin: OK

			[12:40] James Overton: Yes: ROBOT builds on both OWLAPI and Apache Jena.

			[12:40] Susan Bello: OBO foundry home page https://obofoundry.org/

			[12:40] Mark Underwood: Public Service Announcement: A former Ontolog participant James Schoening is chairing two IEEE Standards WGs "P3195 Requirements for a Mid-Level Ontology and Extensions" and P3195.1 Common Core Ontology (CCO) (Conforms to ISO/IEC-JTC1-21838-2 Basic Formal Ontology See https://sagroups.ieee.org/oswg/ This is open to the public; IEEE membership helpful but not required

			[12:41] Nico Matentzoglu: Cogan, we can present DOS-DP which is the design pattern system we use in OBO if you are interested/there is time

			[12:42] Nico Matentzoglu: Ahhhhh Haha I JUST organised a great Seminar on Wikidata with two excellent Wikidata experts… on the 21st March!

			[12:42] James A. Overton: Replying to Christopher Lozinski: OBO projects use OWL (Web Ontology Language), and so they are more than just tree.

			[12:43] Nico Matentzoglu: oops

			[12:43] Cogan Shimizu: yes, dos-dp patterns have been on my radar for some time, but I haven't really had a chance to carve out bandwidth to discuss the interoperability of our paradigms. Perhaps this is a good kick -- we can possibly perhaps have a call this month?

			[12:43] Nico Matentzoglu: I will follow up with you on slack

			[12:43] Cogan Shimizu: possibly perhaps /facepalm

			[12:44] James A. Overton: Replying to RaviSharma: RO may not be as formal as you are suggesting. The core RO relations owe a lot to older versions of BFO, but have not followed recent changes to relations in ISO BFO 2020.

			[12:48] Mark Underwood: @Nico Can you post a link to the March Wikipdata meeting you alluded to? Thx

			[12:48] Nico Matentzoglu: (To whoever is organising the Wikidata session: I am happy to try and redirect our Wikidata seminar under the wings of ontosummit, but I need to talk to the speakers first)

			[12:48] ToddSchneider: Where/when does ontological analysis come in?

			Competency question by themselves are not sufficient. They are only a subset of requirements for development of an ontology.

			[12:54] James A. Overton: Nico: I'll reach out to you and Gary about the Wikidata session.

			[10:01] James Overton: Thanks for coming to our kickoff session everyone! Looking forward to seeing you next week!

			[13:02] Joanne Luciano: It's so wonderful to see everyone and honor Peter. I have to leave for another meeting. Happy New Year -and all the best in good health! Take care, bye for now.

			[13:04] RaviSharma: Q for Corbin have the geolocation accuracies or relevance improved with these design patterns

			[13:06] RaviSharma: Robert Rovetto commented among others education and ISO and Cogan's work.

	== Resources ==		== Resources ==

KenBaclawski at 20:15, 18 January 2023

2023-01-18T20:15:55Z

← Older revision		Revision as of 20:15, 18 January 2023
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	* [[GaryBergCross\|Gary Berg-Cross]]		* [[GaryBergCross\|Gary Berg-Cross]]
	* [[JamesOverton\|James A. Overton]]		* [[JamesOverton\|James A. Overton]]
	* [[JenniferGiron\|Jennifer C. ~~Giron~~]]		* [[JenniferGiron\|Jennifer C. Girón]]
	* [[JieZheng\|Jie Zheng]]		* [[JieZheng\|Jie Zheng]]
	* [[JimBalholt\|Jim Balholt]]		* [[JimBalholt\|Jim Balholt]]
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	* [[NancyWiegand\|Nancy Wiegand]]		* [[NancyWiegand\|Nancy Wiegand]]
	* [[NicoMatentzoglu\|Nico Matentzoglu]]		* [[NicoMatentzoglu\|Nico Matentzoglu]]
	* [[PhilipStroemert\|Philip ~~Stroemert~~]]		* [[PhilipStroemert\|Philip Strömert]]
	* [[RandiVita\|Randi Vita]]		* [[RandiVita\|Randi Vita]]
	* [[RaviSharma\|Ravi Sharma]]		* [[RaviSharma\|Ravi Sharma]]
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	* [[SabriaToro\|Sabria Toro]]		* [[SabriaToro\|Sabria Toro]]
	* [[SamsonTu\|Samson Tu]]		* [[SamsonTu\|Samson Tu]]
	* [[SierraMoxon\|~~sierra moxon~~]]		* [[SierraMoxon\|Sierra Moxon]]
	* [[SteveRay\|Steve Ray]]		* [[SteveRay\|Steve Ray]]
	* [[SusanBello\|Susan Bello]]		* [[SusanBello\|Susan Bello]]

KenBaclawski at 20:12, 18 January 2023

2023-01-18T20:12:36Z

@@ Line 28: / Line 28: @@
 * 12:00 - 12:05 '''[[KenBaclawski|Ken Baclawski]]''' Tribute to [[PeterYim|Peter Yim]]
 * 12:05 - 12:10 '''[[KenBaclawski|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs
-* 12:10 - 12:20 '''[[GaryBergCross|Gary Berg-Cross]]''' and '''[[JamesOverton|James Overton]]''' ''Summit Vision'' [https://bit.ly/3HeJ1WI SLides]
+* 12:10 - 12:20 '''[[GaryBergCross|Gary Berg-Cross]]''' and '''[[JamesOverton|James Overton]]''' ''Summit Vision'' [https://bit.ly/3HeJ1WI Slides]
 * 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''
 * 12:30 - 12:40 '''[[GaryBergCross|Gary Berg-Cross]]''' and '''[[JamesOverton|James Overton]] ''Summit Schedule''
@@ Line 43: / Line 43: @@
 == Attendees ==
 == Discussion ==
 == Resources ==
 == Previous Meetings ==

KenBaclawski at 19:22, 18 January 2023

2023-01-18T19:22:02Z

← Older revision		Revision as of 19:22, 18 January 2023
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	* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools'' [https://bit.ly/3ZJpmW0 Slides]		* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools'' [https://bit.ly/3ZJpmW0 Slides]
	* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion		* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion
			* [https://bit.ly/3WkN2Nq Video Recording]

	== Conference Call Information ==		== Conference Call Information ==

KenBaclawski at 16:39, 18 January 2023

2023-01-18T16:39:19Z

← Older revision		Revision as of 16:39, 18 January 2023
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	* 12:00 - 12:05 '''[[KenBaclawski\|Ken Baclawski]]''' Tribute to [[PeterYim\|Peter Yim]]		* 12:00 - 12:05 '''[[KenBaclawski\|Ken Baclawski]]''' Tribute to [[PeterYim\|Peter Yim]]
	* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs		* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs
	* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision''		* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision'' [https://bit.ly/3HeJ1WI SLides]
	* 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''		* 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''
	* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''		* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''
	* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools''		* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools'' [https://bit.ly/3ZJpmW0 Slides]
	* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion		* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion

KenBaclawski: /* Ontology Summit 2023 {{#show:{{PAGENAME}}|?session}} */

2023-01-18T16:36:49Z

Ontology Summit 2023 {{#show:{{PAGENAME}}|?session}}

← Older revision		Revision as of 16:36, 18 January 2023
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	\|}		\|}

	= [[OntologySummit2023\|Ontology Summit 2023]] ~~{{#show~~:~~{{PAGENAME}}\|?session}}~~ =		= [[OntologySummit2023\|Ontology Summit 2023]]
	~~{{:OntologySummit2023/Description}}~~
			== Helping scientific researchers make better use of ontologies: Tools, Methods and Best Practices ==


	{{border\|{{border\|<center>In memoriam</center><center>'''[[PeterYim\|Peter Yim]]'''</center><center>1951-2022</center>Our friend and Ontolog Forum founder [[PeterYim\|Peter P. Yim]] has passed away. It is very sad news to all of us who worked with him, and a great loss to the community he founded and nurtured for many years. He will be missed. This Ontology Summit is dedicated to the memory of Peter.\|width=5px\|color=white}}\|width=5px\|color=black\|display=block}}		{{border\|{{border\|<center>In memoriam</center><center>'''[[PeterYim\|Peter Yim]]'''</center><center>1951-2022</center>Our friend and Ontolog Forum founder [[PeterYim\|Peter P. Yim]] has passed away. It is very sad news to all of us who worked with him, and a great loss to the community he founded and nurtured for many years. He will be missed. This Ontology Summit is dedicated to the memory of Peter.\|width=5px\|color=white}}\|width=5px\|color=black\|display=block}}

KenBaclawski: /* Agenda */

2023-01-17T16:44:32Z

Agenda

← Older revision		Revision as of 16:44, 17 January 2023
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	* 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''		* 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''
	* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''		* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''
	* 12:40 - 12:50 '''Cogan Matthew Shimizu''' ''Methods and Tools''		* 12:40 - 12:50 '''Cogan Matthew Shimizu/Pascal Hitzler''' ''Methods and Tools''
	* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion		* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion

KenBaclawski: /* Agenda */

2023-01-17T07:57:37Z

Agenda

← Older revision		Revision as of 07:57, 17 January 2023
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	* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs		* 12:05 - 12:10 '''[[KenBaclawski\|Ken Baclawski]]''' Summit Kickoff and Introduction of the Summit Co-Chairs
	* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision''		* 12:10 - 12:20 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]]''' ''Summit Vision''
	* 12:20 - 12:30 '''~~[[AsiyahLin\|~~Asiyah Lin]]''' ''US2TS Panel Summary''		* 12:20 - 12:30 '''Asiyah Lin''' ''US2TS Panel Summary''
	* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''		* 12:30 - 12:40 '''[[GaryBergCross\|Gary Berg-Cross]]''' and '''[[JamesOverton\|James Overton]] ''Summit Schedule''
	* 12:40 - 12:50 '''~~[[PascalHitzler\|Pascal Hitzler]]~~''' ''Methods and Tools''		* 12:40 - 12:50 '''Cogan Matthew Shimizu''' ''Methods and Tools''
	* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion		* 12:50 - 13:00 '''[[GaryBergCross\|Gary Berg-Cross]]''' Conclusion and Discussion

← Older revision		Revision as of 20:15, 18 January 2023
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	* [[GaryBergCross\|Gary Berg-Cross]]		* [[GaryBergCross\|Gary Berg-Cross]]
	* [[JamesOverton\|James A. Overton]]		* [[JamesOverton\|James A. Overton]]
	* [[JenniferGiron\|Jennifer C. ~~Giron~~]]		* [[JenniferGiron\|Jennifer C. Girón]]
	* [[JieZheng\|Jie Zheng]]		* [[JieZheng\|Jie Zheng]]
	* [[JimBalholt\|Jim Balholt]]		* [[JimBalholt\|Jim Balholt]]
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	* [[NancyWiegand\|Nancy Wiegand]]		* [[NancyWiegand\|Nancy Wiegand]]
	* [[NicoMatentzoglu\|Nico Matentzoglu]]		* [[NicoMatentzoglu\|Nico Matentzoglu]]
	* [[PhilipStroemert\|Philip ~~Stroemert~~]]		* [[PhilipStroemert\|Philip Strömert]]
	* [[RandiVita\|Randi Vita]]		* [[RandiVita\|Randi Vita]]
	* [[RaviSharma\|Ravi Sharma]]		* [[RaviSharma\|Ravi Sharma]]
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	* [[SabriaToro\|Sabria Toro]]		* [[SabriaToro\|Sabria Toro]]
	* [[SamsonTu\|Samson Tu]]		* [[SamsonTu\|Samson Tu]]
	* [[SierraMoxon\|~~sierra moxon~~]]		* [[SierraMoxon\|Sierra Moxon]]
	* [[SteveRay\|Steve Ray]]		* [[SteveRay\|Steve Ray]]
	* [[SusanBello\|Susan Bello]]		* [[SusanBello\|Susan Bello]]